MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Proteus mirabilis
19428wB5_irhom_Sw
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 61
bases: 3,945,692 bps
CDS: 3,505
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 80
misc RNA:
Total features: 3,596
Total number of protein coding genes annotated/found:
3,505
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Items 21 - 40
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5038|JADGLF010000010.1
SEQF5038_00024
Genome Viewer
NA
AA
1263/421
25148-26410
UDP-N-acetyl-D-mannosamine dehydrogenase
SEQF5038|JADGLF010000010.1
SEQF5038_00025
Genome Viewer
NA
AA
1068/356
26407-27474
dTDP-glucose 4%2C6-dehydratase 2
SEQF5038|JADGLF010000010.1
SEQF5038_00026
Genome Viewer
NA
AA
882/294
27493-28374
Glucose-1-phosphate thymidylyltransferase 2
SEQF5038|JADGLF010000010.1
SEQF5038_00027
Genome Viewer
NA
AA
714/238
28352-29065
dTDP-fucosamine acetyltransferase
SEQF5038|JADGLF010000010.1
SEQF5038_00028
Genome Viewer
NA
AA
1131/377
29067-30197
dTDP-4-amino-4%2C6-dideoxygalactose transaminase
SEQF5038|JADGLF010000010.1
SEQF5038_00029
Genome Viewer
NA
AA
1257/419
30199-31455
Lipid III flippase
SEQF5038|JADGLF010000010.1
SEQF5038_00030
Genome Viewer
NA
AA
1086/362
31452-32537
TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase
SEQF5038|JADGLF010000010.1
SEQF5038_00031
Genome Viewer
NA
AA
1365/455
32534-33898
putative ECA polymerase
SEQF5038|JADGLF010000010.1
SEQF5038_00032
Genome Viewer
NA
AA
738/246
33898-34635
UDP-N-acetyl-D-mannosaminuronic acid transferase
SEQF5038|JADGLF010000010.1
SEQF5038_00037
Genome Viewer
NA
AA
318/106
36265-36582
hypothetical protein
SEQF5038|JADGLF010000010.1
SEQF5038_00038
Genome Viewer
NA
AA
1230/410
37874-36645
Protein HemY
SEQF5038|JADGLF010000010.1
SEQF5038_00039
Genome Viewer
NA
AA
1251/417
39129-37879
Protein HemX
SEQF5038|JADGLF010000010.1
SEQF5038_00040
Genome Viewer
NA
AA
738/246
39887-39150
Uroporphyrinogen-III synthase
SEQF5038|JADGLF010000010.1
SEQF5038_00041
Genome Viewer
NA
AA
942/314
40825-39884
Porphobilinogen deaminase
SEQF5038|JADGLF010000010.1
SEQF5038_00042
Genome Viewer
NA
AA
2598/866
41812-44409
Adenylate cyclase
SEQF5038|JADGLF010000010.1
SEQF5038_00043
Genome Viewer
NA
AA
318/106
44796-44479
Iron-sulfur cluster assembly protein CyaY
SEQF5038|JADGLF010000010.1
SEQF5038_00044
Genome Viewer
NA
AA
168/56
44877-45044
hypothetical protein
SEQF5038|JADGLF010000010.1
SEQF5038_00045
Genome Viewer
NA
AA
825/275
45086-45910
Diaminopimelate epimerase
SEQF5038|JADGLF010000010.1
SEQF5038_00046
Genome Viewer
NA
AA
711/237
45935-46645
hypothetical protein
SEQF5038|JADGLF010000010.1
SEQF5038_00047
Genome Viewer
NA
AA
924/308
46642-47565
Tyrosine recombinase XerC
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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